Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm42499-201ENSMUST00000196193 1412 ntBASIC14.25□□□□□ -0.13
Smarcc1P97496 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Gm12461-201ENSMUST00000120231 1239 ntBASIC14.25□□□□□ -0.13
Smarcc1P97496 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Smarcc1P97496 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 AC164556.1-201ENSMUST00000221318 751 ntBASIC14.25□□□□□ -0.13
Smarcc1P97496 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Gm6478-201ENSMUST00000099450 742 ntBASIC14.25□□□□□ -0.13
Smarcc1P97496 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smarcc1P97496 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 CT010447.1-201ENSMUST00000225657 1608 ntBASIC14.25□□□□□ -0.13
Smarcc1P97496 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Smarcc1P97496 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smarcc1P97496 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Gm15519-201ENSMUST00000120088 1566 ntBASIC14.25□□□□□ -0.13
Smarcc1P97496 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Smarcc1P97496 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Gm13094-201ENSMUST00000117930 409 ntBASIC14.24□□□□□ -0.13
Smarcc1P97496 Gm3828-201ENSMUST00000121817 257 ntBASIC14.24□□□□□ -0.13
Smarcc1P97496 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Gm42751-201ENSMUST00000198065 559 ntBASIC14.24□□□□□ -0.13
Smarcc1P97496 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.24□□□□□ -0.13
Smarcc1P97496 Gm4930-201ENSMUST00000219926 1087 ntBASIC14.24□□□□□ -0.13
Smarcc1P97496 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Smarcc1P97496 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc1P97496 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smarcc1P97496 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.23□□□□□ -0.13
Smarcc1P97496 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Smarcc1P97496 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.23□□□□□ -0.13
Smarcc1P97496 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Gm15625-201ENSMUST00000117617 1093 ntBASIC14.23□□□□□ -0.13
Smarcc1P97496 Gng5-ps-201ENSMUST00000120931 205 ntBASIC14.23□□□□□ -0.13
Smarcc1P97496 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smarcc1P97496 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smarcc1P97496 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Smarcc1P97496 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC14.23□□□□□ -0.13
Smarcc1P97496 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms