Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Gm10652-201ENSMUST00000199790 2622 ntBASIC14.26□□□□□ -0.13
Nkx2-3P97334 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gm42499-201ENSMUST00000196193 1412 ntBASIC14.25□□□□□ -0.13
Nkx2-3P97334 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.25□□□□□ -0.13
Nkx2-3P97334 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gm4917-201ENSMUST00000121452 650 ntBASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gm16165-201ENSMUST00000160140 795 ntBASIC14.25□□□□□ -0.13
Nkx2-3P97334 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gm4753-201ENSMUST00000188327 1255 ntBASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gm19918-201ENSMUST00000194858 400 ntBASIC14.25□□□□□ -0.13
Nkx2-3P97334 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gm45258-201ENSMUST00000210042 853 ntBASIC14.25□□□□□ -0.13
Nkx2-3P97334 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 AC153962.2-201ENSMUST00000219417 550 ntBASIC14.25□□□□□ -0.13
Nkx2-3P97334 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gm9791-201ENSMUST00000060997 447 ntBASIC14.25□□□□□ -0.13
Nkx2-3P97334 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gm5449-201ENSMUST00000081132 357 ntBASIC14.25□□□□□ -0.13
Nkx2-3P97334 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-3P97334 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.25□□□□□ -0.13
Nkx2-3P97334 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx2-3P97334 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Gm9507-202ENSMUST00000180157 654 ntBASIC14.24□□□□□ -0.13
Nkx2-3P97334 Gm28975-201ENSMUST00000186412 686 ntBASIC14.24□□□□□ -0.13
Nkx2-3P97334 Gm42779-201ENSMUST00000198807 406 ntBASIC14.24□□□□□ -0.13
Nkx2-3P97334 Gm7880-201ENSMUST00000203748 871 ntBASIC14.24□□□□□ -0.13
Nkx2-3P97334 Gm26782-203ENSMUST00000227103 751 ntBASIC14.24□□□□□ -0.13
Nkx2-3P97334 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Gm7589-201ENSMUST00000085631 534 ntBASIC14.24□□□□□ -0.13
Nkx2-3P97334 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.24□□□□□ -0.13
Nkx2-3P97334 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-3P97334 Gm13135-201ENSMUST00000117628 3121 ntBASIC14.24□□□□□ -0.13
Nkx2-3P97334 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-3P97334 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx2-3P97334 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms