Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Gm37944-201ENSMUST00000194233 414 ntBASIC18.29■□□□□ 0.52
Cux2P70298 Gm44173-201ENSMUST00000204316 132 ntBASIC18.29■□□□□ 0.52
Cux2P70298 Gm8162-201ENSMUST00000213951 665 ntBASIC18.29■□□□□ 0.52
Cux2P70298 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC18.29■□□□□ 0.52
Cux2P70298 AC139155.1-201ENSMUST00000226043 444 ntBASIC18.29■□□□□ 0.52
Cux2P70298 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Cux2P70298 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cux2P70298 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cux2P70298 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cux2P70298 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Cux2P70298 Gm3836-201ENSMUST00000211377 1613 ntBASIC18.28■□□□□ 0.52
Cux2P70298 Gm23129-201ENSMUST00000104259 132 ntBASIC18.28■□□□□ 0.52
Cux2P70298 Gm24161-201ENSMUST00000104592 130 ntBASIC18.28■□□□□ 0.52
Cux2P70298 Gm14592-201ENSMUST00000117201 560 ntBASIC18.28■□□□□ 0.52
Cux2P70298 Gm12377-201ENSMUST00000118656 252 ntBASIC18.28■□□□□ 0.52
Cux2P70298 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cux2P70298 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC18.28■□□□□ 0.52
Cux2P70298 Mir6396-201ENSMUST00000183603 111 ntBASIC18.28■□□□□ 0.52
Cux2P70298 Gm42908-201ENSMUST00000197508 870 ntBASIC18.28■□□□□ 0.52
Cux2P70298 Gm44388-201ENSMUST00000204350 258 ntBASIC18.28■□□□□ 0.52
Cux2P70298 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC18.28■□□□□ 0.52
Cux2P70298 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC18.28■□□□□ 0.52
Cux2P70298 Gm3791-201ENSMUST00000220790 768 ntBASIC18.28■□□□□ 0.52
Cux2P70298 CT009713.2-201ENSMUST00000225532 1149 ntBASIC18.28■□□□□ 0.52
Cux2P70298 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cux2P70298 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cux2P70298 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 AC155245.1-201ENSMUST00000222266 1804 ntBASIC18.28■□□□□ 0.52
Cux2P70298 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Cux2P70298 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cux2P70298 Gm43760-201ENSMUST00000202120 3015 ntBASIC18.28■□□□□ 0.52
Cux2P70298 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Gm13135-201ENSMUST00000117628 3121 ntBASIC18.27■□□□□ 0.52
Cux2P70298 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cux2P70298 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC18.27■□□□□ 0.52
Cux2P70298 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Gm7539-201ENSMUST00000189789 630 ntBASIC18.27■□□□□ 0.52
Cux2P70298 Gm43097-201ENSMUST00000196867 151 ntBASIC18.27■□□□□ 0.52
Cux2P70298 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC18.27■□□□□ 0.52
Cux2P70298 Gm3635-201ENSMUST00000212314 354 ntBASIC18.27■□□□□ 0.52
Cux2P70298 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC18.27■□□□□ 0.52
Cux2P70298 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cux2P70298 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Gm42928-201ENSMUST00000197338 3339 ntBASIC18.27■□□□□ 0.52
Cux2P70298 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cux2P70298 Gm43570-201ENSMUST00000199951 3688 ntBASIC18.27■□□□□ 0.51
Cux2P70298 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC18.27■□□□□ 0.51
Cux2P70298 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cux2P70298 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cux2P70298 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cux2P70298 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cux2P70298 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC18.26■□□□□ 0.51
Cux2P70298 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Gm42803-201ENSMUST00000201051 451 ntBASIC18.26■□□□□ 0.51
Cux2P70298 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC18.26■□□□□ 0.51
Cux2P70298 Gm18621-201ENSMUST00000222677 679 ntBASIC18.26■□□□□ 0.51
Cux2P70298 AC127583.1-201ENSMUST00000224351 540 ntBASIC18.26■□□□□ 0.51
Cux2P70298 Gm10617-201ENSMUST00000098368 1172 ntBASIC18.26■□□□□ 0.51
Cux2P70298 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Cux2P70298 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC18.26■□□□□ 0.51
Cux2P70298 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms