Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.66□□□□□ -0.7
Six5P70178 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Six5P70178 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.66□□□□□ -0.7
Six5P70178 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.66□□□□□ -0.7
Six5P70178 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.66□□□□□ -0.7
Six5P70178 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.66□□□□□ -0.7
Six5P70178 Gm21092-201ENSMUST00000178995 955 ntBASIC10.66□□□□□ -0.7
Six5P70178 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.66□□□□□ -0.7
Six5P70178 Gm7504-201ENSMUST00000201449 424 ntBASIC10.66□□□□□ -0.7
Six5P70178 Gm8574-201ENSMUST00000203207 924 ntBASIC10.66□□□□□ -0.7
Six5P70178 Gm17831-201ENSMUST00000205579 900 ntBASIC10.66□□□□□ -0.7
Six5P70178 Gm5996-201ENSMUST00000211110 718 ntBASIC10.66□□□□□ -0.7
Six5P70178 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.66□□□□□ -0.7
Six5P70178 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.66□□□□□ -0.7
Six5P70178 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.66□□□□□ -0.7
Six5P70178 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.66□□□□□ -0.7
Six5P70178 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Six5P70178 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Six5P70178 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.66□□□□□ -0.7
Six5P70178 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.66□□□□□ -0.7
Six5P70178 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Six5P70178 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.65□□□□□ -0.7
Six5P70178 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Six5P70178 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.65□□□□□ -0.7
Six5P70178 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Six5P70178 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.65□□□□□ -0.7
Six5P70178 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Six5P70178 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Six5P70178 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Six5P70178 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Six5P70178 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Six5P70178 Gm12463-201ENSMUST00000118271 849 ntBASIC10.65□□□□□ -0.7
Six5P70178 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Gm15374-201ENSMUST00000119313 844 ntBASIC10.65□□□□□ -0.7
Six5P70178 Gm16219-201ENSMUST00000120096 274 ntBASIC10.65□□□□□ -0.7
Six5P70178 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.65□□□□□ -0.7
Six5P70178 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.65□□□□□ -0.7
Six5P70178 Gm15549-201ENSMUST00000121595 622 ntBASIC10.65□□□□□ -0.7
Six5P70178 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.65□□□□□ -0.7
Six5P70178 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.65□□□□□ -0.7
Six5P70178 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.65□□□□□ -0.7
Six5P70178 Gm43186-201ENSMUST00000198130 824 ntBASIC10.65□□□□□ -0.7
Six5P70178 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Six5P70178 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Six5P70178 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.65□□□□□ -0.7
Six5P70178 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Six5P70178 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Six5P70178 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Six5P70178 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.65□□□□□ -0.7
Six5P70178 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Six5P70178 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Six5P70178 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Six5P70178 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Six5P70178 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Six5P70178 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Six5P70178 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Six5P70178 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Six5P70178 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Six5P70178 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Six5P70178 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.64□□□□□ -0.71
Six5P70178 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Six5P70178 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.64□□□□□ -0.71
Six5P70178 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.64□□□□□ -0.71
Six5P70178 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms