Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm4909-201ENSMUST00000118749 794 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm12380-201ENSMUST00000119012 544 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm7722-201ENSMUST00000120646 741 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.05□□□□□ -0.8
Sec61a1P61620 B9d1os-201ENSMUST00000137010 674 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm25732-201ENSMUST00000175168 60 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.04□□□□□ -0.8
Sec61a1P61620 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.04□□□□□ -0.8
Sec61a1P61620 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sec61a1P61620 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.04□□□□□ -0.8
Sec61a1P61620 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.04□□□□□ -0.8
Sec61a1P61620 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.04□□□□□ -0.8
Sec61a1P61620 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Gm15711-201ENSMUST00000118889 535 ntBASIC10.04□□□□□ -0.8
Sec61a1P61620 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.04□□□□□ -0.8
Sec61a1P61620 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.04□□□□□ -0.8
Sec61a1P61620 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.04□□□□□ -0.8
Sec61a1P61620 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.04□□□□□ -0.8
Sec61a1P61620 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Rprl1-201ENSMUST00000158050 327 ntBASIC10.04□□□□□ -0.8
Sec61a1P61620 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.04□□□□□ -0.8
Sec61a1P61620 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Sec61a1P61620 Gm43962-201ENSMUST00000203898 190 ntBASIC10.04□□□□□ -0.8
Sec61a1P61620 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.04□□□□□ -0.8
Sec61a1P61620 Gm19208-201ENSMUST00000213861 912 ntBASIC10.04□□□□□ -0.8
Sec61a1P61620 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.04□□□□□ -0.8
Sec61a1P61620 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Sec61a1P61620 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.04□□□□□ -0.8
Sec61a1P61620 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sec61a1P61620 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a1P61620 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms