Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.87□□□□□ -0.67
Cdkn2bP55271 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.87□□□□□ -0.67
Cdkn2bP55271 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.87□□□□□ -0.67
Cdkn2bP55271 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Gm23949-201ENSMUST00000104027 127 ntBASIC10.87□□□□□ -0.67
Cdkn2bP55271 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Gm12380-201ENSMUST00000119012 544 ntBASIC10.87□□□□□ -0.67
Cdkn2bP55271 Gm22846-201ENSMUST00000157706 270 ntBASIC10.87□□□□□ -0.67
Cdkn2bP55271 Gm28071-201ENSMUST00000190355 478 ntBASIC10.87□□□□□ -0.67
Cdkn2bP55271 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.87□□□□□ -0.67
Cdkn2bP55271 Gm43758-201ENSMUST00000199500 367 ntBASIC10.87□□□□□ -0.67
Cdkn2bP55271 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Gm45575-201ENSMUST00000210283 548 ntBASIC10.87□□□□□ -0.67
Cdkn2bP55271 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Cdkn2bP55271 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdkn2bP55271 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.86□□□□□ -0.67
Cdkn2bP55271 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.86□□□□□ -0.67
Cdkn2bP55271 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.86□□□□□ -0.67
Cdkn2bP55271 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdkn2bP55271 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.86□□□□□ -0.67
Cdkn2bP55271 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.86□□□□□ -0.67
Cdkn2bP55271 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.86□□□□□ -0.67
Cdkn2bP55271 Gm45433-201ENSMUST00000209386 247 ntBASIC10.86□□□□□ -0.67
Cdkn2bP55271 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.86□□□□□ -0.67
Cdkn2bP55271 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Cdkn2bP55271 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdkn2bP55271 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Gm14724-201ENSMUST00000118400 537 ntBASIC10.85□□□□□ -0.67
Cdkn2bP55271 Gm15711-201ENSMUST00000118889 535 ntBASIC10.85□□□□□ -0.67
Cdkn2bP55271 Gm11573-201ENSMUST00000119956 394 ntBASIC10.85□□□□□ -0.67
Cdkn2bP55271 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.85□□□□□ -0.67
Cdkn2bP55271 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms