Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Abcd3P55096 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Abcd3P55096 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Abcd3P55096 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Abcd3P55096 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Abcd3P55096 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Abcd3P55096 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Abcd3P55096 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Abcd3P55096 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Abcd3P55096 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Abcd3P55096 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Abcd3P55096 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Abcd3P55096 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Abcd3P55096 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.19□□□□□ -0.78
Abcd3P55096 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.19□□□□□ -0.78
Abcd3P55096 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Abcd3P55096 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Abcd3P55096 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.19□□□□□ -0.78
Abcd3P55096 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.19□□□□□ -0.78
Abcd3P55096 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.19□□□□□ -0.78
Abcd3P55096 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.19□□□□□ -0.78
Abcd3P55096 Gm22902-201ENSMUST00000158488 302 ntBASIC10.19□□□□□ -0.78
Abcd3P55096 Gm24844-201ENSMUST00000158679 127 ntBASIC10.19□□□□□ -0.78
Abcd3P55096 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Abcd3P55096 Olfml3-204ENSMUST00000169286 874 ntBASIC10.19□□□□□ -0.78
Abcd3P55096 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.19□□□□□ -0.78
Abcd3P55096 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.19□□□□□ -0.78
Abcd3P55096 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Abcd3P55096 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Gm5996-201ENSMUST00000211110 718 ntBASIC10.19□□□□□ -0.78
Abcd3P55096 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Abcd3P55096 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Abcd3P55096 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Abcd3P55096 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Abcd3P55096 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Abcd3P55096 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Abcd3P55096 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Abcd3P55096 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.18□□□□□ -0.78
Abcd3P55096 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Abcd3P55096 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Abcd3P55096 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Abcd3P55096 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.18□□□□□ -0.78
Abcd3P55096 Gm23251-201ENSMUST00000103773 110 ntBASIC10.18□□□□□ -0.78
Abcd3P55096 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Abcd3P55096 Gm15617-201ENSMUST00000118973 771 ntBASIC10.18□□□□□ -0.78
Abcd3P55096 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.18□□□□□ -0.78
Abcd3P55096 Gm7504-201ENSMUST00000201449 424 ntBASIC10.18□□□□□ -0.78
Abcd3P55096 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Gm44506-201ENSMUST00000206278 965 ntBASIC10.18□□□□□ -0.78
Abcd3P55096 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.18□□□□□ -0.78
Abcd3P55096 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.18□□□□□ -0.78
Abcd3P55096 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.18□□□□□ -0.78
Abcd3P55096 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Abcd3P55096 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Abcd3P55096 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Abcd3P55096 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.18□□□□□ -0.78
Abcd3P55096 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms