Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.96□□□□□ -0.65
Sox3P53784 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sox3P53784 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sox3P53784 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Sox3P53784 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox3P53784 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Sox3P53784 Gm11511-201ENSMUST00000118146 540 ntBASIC10.96□□□□□ -0.65
Sox3P53784 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.96□□□□□ -0.65
Sox3P53784 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Gm24398-201ENSMUST00000157870 109 ntBASIC10.96□□□□□ -0.65
Sox3P53784 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.96□□□□□ -0.65
Sox3P53784 Gm18201-201ENSMUST00000174735 875 ntBASIC10.96□□□□□ -0.65
Sox3P53784 Gm9022-201ENSMUST00000182482 992 ntBASIC10.96□□□□□ -0.65
Sox3P53784 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.96□□□□□ -0.65
Sox3P53784 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.96□□□□□ -0.65
Sox3P53784 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.96□□□□□ -0.65
Sox3P53784 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.96□□□□□ -0.65
Sox3P53784 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.96□□□□□ -0.65
Sox3P53784 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox3P53784 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Sox3P53784 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox3P53784 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox3P53784 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox3P53784 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox3P53784 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox3P53784 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.96□□□□□ -0.66
Sox3P53784 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox3P53784 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox3P53784 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox3P53784 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.95□□□□□ -0.66
Sox3P53784 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox3P53784 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sox3P53784 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.95□□□□□ -0.66
Sox3P53784 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Mir181d-201ENSMUST00000102383 72 ntBASIC10.95□□□□□ -0.66
Sox3P53784 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sox3P53784 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox3P53784 Gm16166-201ENSMUST00000118291 787 ntBASIC10.95□□□□□ -0.66
Sox3P53784 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.95□□□□□ -0.66
Sox3P53784 Gm14942-201ENSMUST00000119642 336 ntBASIC10.95□□□□□ -0.66
Sox3P53784 Gm11836-201ENSMUST00000121022 441 ntBASIC10.95□□□□□ -0.66
Sox3P53784 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox3P53784 Gm8451-201ENSMUST00000170338 447 ntBASIC10.95□□□□□ -0.66
Sox3P53784 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sox3P53784 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sox3P53784 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox3P53784 Gm45575-201ENSMUST00000210283 548 ntBASIC10.95□□□□□ -0.66
Sox3P53784 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.95□□□□□ -0.66
Sox3P53784 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox3P53784 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Gm7536-201ENSMUST00000077389 444 ntBASIC10.95□□□□□ -0.66
Sox3P53784 Gm5453-201ENSMUST00000080866 447 ntBASIC10.95□□□□□ -0.66
Sox3P53784 Gm23680-201ENSMUST00000083162 164 ntBASIC10.95□□□□□ -0.66
Sox3P53784 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sox3P53784 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.95□□□□□ -0.66
Sox3P53784 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sox3P53784 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Sox3P53784 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox3P53784 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox3P53784 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox3P53784 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms