Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Vps4bP46467 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Vps4bP46467 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.56□□□□□ -0.56
Vps4bP46467 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Vps4bP46467 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Vps4bP46467 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.55□□□□□ -0.56
Vps4bP46467 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.55□□□□□ -0.56
Vps4bP46467 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Vps4bP46467 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Vps4bP46467 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Vps4bP46467 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.55□□□□□ -0.56
Vps4bP46467 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.55□□□□□ -0.56
Vps4bP46467 Gm7150-201ENSMUST00000122032 981 ntBASIC11.55□□□□□ -0.56
Vps4bP46467 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.55□□□□□ -0.56
Vps4bP46467 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.55□□□□□ -0.56
Vps4bP46467 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.55□□□□□ -0.56
Vps4bP46467 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.55□□□□□ -0.56
Vps4bP46467 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Vps4bP46467 Gm9550-201ENSMUST00000161130 862 ntBASIC11.55□□□□□ -0.56
Vps4bP46467 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.55□□□□□ -0.56
Vps4bP46467 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.55□□□□□ -0.56
Vps4bP46467 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.55□□□□□ -0.56
Vps4bP46467 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.55□□□□□ -0.56
Vps4bP46467 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Vps4bP46467 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vps4bP46467 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Vps4bP46467 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.54□□□□□ -0.56
Vps4bP46467 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.54□□□□□ -0.56
Vps4bP46467 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.54□□□□□ -0.56
Vps4bP46467 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Gm20495-201ENSMUST00000173902 235 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 Gm8100-201ENSMUST00000182906 988 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 Gm18730-201ENSMUST00000218038 343 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 Gm6867-201ENSMUST00000219165 425 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Vps4bP46467 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Vps4bP46467 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Vps4bP46467 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps4bP46467 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.54□□□□□ -0.56
Vps4bP46467 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms