Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfsf4P43488 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.97□□□□□ -0.65
Tnfsf4P43488 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Gm15711-201ENSMUST00000118889 535 ntBASIC10.97□□□□□ -0.65
Tnfsf4P43488 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.97□□□□□ -0.65
Tnfsf4P43488 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.97□□□□□ -0.65
Tnfsf4P43488 Gm44262-201ENSMUST00000204969 372 ntBASIC10.97□□□□□ -0.65
Tnfsf4P43488 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Gm6867-201ENSMUST00000219165 425 ntBASIC10.97□□□□□ -0.65
Tnfsf4P43488 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.97□□□□□ -0.65
Tnfsf4P43488 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.97□□□□□ -0.65
Tnfsf4P43488 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tnfsf4P43488 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Gm12380-201ENSMUST00000119012 544 ntBASIC10.96□□□□□ -0.65
Tnfsf4P43488 Gm8566-201ENSMUST00000120174 465 ntBASIC10.96□□□□□ -0.65
Tnfsf4P43488 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.96□□□□□ -0.65
Tnfsf4P43488 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Gm24749-201ENSMUST00000157838 343 ntBASIC10.96□□□□□ -0.65
Tnfsf4P43488 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.96□□□□□ -0.65
Tnfsf4P43488 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Tnfsf4P43488 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Tnfsf4P43488 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.96□□□□□ -0.65
Tnfsf4P43488 Gm7783-201ENSMUST00000204795 781 ntBASIC10.96□□□□□ -0.65
Tnfsf4P43488 Gm45575-201ENSMUST00000210283 548 ntBASIC10.96□□□□□ -0.65
Tnfsf4P43488 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.96□□□□□ -0.65
Tnfsf4P43488 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.96□□□□□ -0.65
Tnfsf4P43488 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Tnfsf4P43488 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfsf4P43488 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Tnfsf4P43488 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfsf4P43488 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfsf4P43488 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfsf4P43488 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.96□□□□□ -0.66
Tnfsf4P43488 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tnfsf4P43488 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms