Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm43058-201ENSMUST00000197645 625 ntBASIC10.42□□□□□ -0.74
Nkx2-2P42586 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.42□□□□□ -0.74
Nkx2-2P42586 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.42□□□□□ -0.74
Nkx2-2P42586 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.42□□□□□ -0.74
Nkx2-2P42586 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.41□□□□□ -0.74
Nkx2-2P42586 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.41□□□□□ -0.74
Nkx2-2P42586 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm8302-201ENSMUST00000119217 852 ntBASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm11331-201ENSMUST00000119764 288 ntBASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm44315-201ENSMUST00000203041 219 ntBASIC10.41□□□□□ -0.74
Nkx2-2P42586 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.41□□□□□ -0.74
Nkx2-2P42586 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm23105-201ENSMUST00000083719 134 ntBASIC10.41□□□□□ -0.74
Nkx2-2P42586 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-2P42586 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm13408-201ENSMUST00000119822 798 ntBASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm13935-201ENSMUST00000121859 798 ntBASIC10.4□□□□□ -0.74
Nkx2-2P42586 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm19246-201ENSMUST00000173599 255 ntBASIC10.4□□□□□ -0.74
Nkx2-2P42586 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Nkx2-2P42586 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms