Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Gm4917-201ENSMUST00000121452 650 ntBASIC11.71□□□□□ -0.53
Cxcl12P40224 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Gm25288-201ENSMUST00000122800 265 ntBASIC11.71□□□□□ -0.53
Cxcl12P40224 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Gm19246-201ENSMUST00000173599 255 ntBASIC11.71□□□□□ -0.53
Cxcl12P40224 Snord55-201ENSMUST00000174939 79 ntBASIC11.71□□□□□ -0.53
Cxcl12P40224 Gm5976-201ENSMUST00000180794 996 ntBASIC11.71□□□□□ -0.53
Cxcl12P40224 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.71□□□□□ -0.53
Cxcl12P40224 Gm38314-201ENSMUST00000195709 625 ntBASIC11.71□□□□□ -0.53
Cxcl12P40224 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.71□□□□□ -0.53
Cxcl12P40224 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.71□□□□□ -0.53
Cxcl12P40224 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.71□□□□□ -0.53
Cxcl12P40224 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.71□□□□□ -0.53
Cxcl12P40224 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl12P40224 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl12P40224 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl12P40224 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl12P40224 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl12P40224 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl12P40224 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Cxcl12P40224 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl12P40224 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.71□□□□□ -0.54
Cxcl12P40224 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl12P40224 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl12P40224 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl12P40224 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.7□□□□□ -0.54
Cxcl12P40224 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.7□□□□□ -0.54
Cxcl12P40224 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.7□□□□□ -0.54
Cxcl12P40224 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm6755-201ENSMUST00000100598 864 ntBASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm6740-201ENSMUST00000100617 864 ntBASIC11.7□□□□□ -0.54
Cxcl12P40224 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm12947-201ENSMUST00000116114 420 ntBASIC11.7□□□□□ -0.54
Cxcl12P40224 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm12028-201ENSMUST00000118065 436 ntBASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm13281-201ENSMUST00000120871 567 ntBASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cxcl12P40224 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.7□□□□□ -0.54
Cxcl12P40224 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.7□□□□□ -0.54
Cxcl12P40224 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.7□□□□□ -0.54
Cxcl12P40224 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl12P40224 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC11.7□□□□□ -0.54
Cxcl12P40224 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms