Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm15454-201ENSMUST00000179718 483 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Gm28032-201ENSMUST00000184104 96 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd1P40201 AC161877.1-201ENSMUST00000227736 699 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Gm6344-201ENSMUST00000075962 483 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chd1P40201 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd1P40201 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chd1P40201 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd1P40201 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chd1P40201 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chd1P40201 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Gm44664-201ENSMUST00000206841 1786 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Gm8806-201ENSMUST00000120076 1407 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Chd1P40201 AC147366.2-201ENSMUST00000226859 2038 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Gm44086-201ENSMUST00000203251 2349 ntBASIC16.66■□□□□ 0.26
Chd1P40201 Gm13169-201ENSMUST00000122090 1459 ntBASIC16.66■□□□□ 0.26
Chd1P40201 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Chd1P40201 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Chd1P40201 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chd1P40201 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Chd1P40201 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Chd1P40201 Gm7672-201ENSMUST00000180915 872 ntBASIC16.66■□□□□ 0.26
Chd1P40201 Gm27149-201ENSMUST00000184716 1266 ntBASIC16.66■□□□□ 0.26
Chd1P40201 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC16.66■□□□□ 0.26
Chd1P40201 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC16.66■□□□□ 0.26
Chd1P40201 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chd1P40201 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Chd1P40201 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.66■□□□□ 0.26
Chd1P40201 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd1P40201 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Chd1P40201 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chd1P40201 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chd1P40201 Gm11800-201ENSMUST00000120050 579 ntBASIC16.65■□□□□ 0.26
Chd1P40201 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Chd1P40201 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC16.65■□□□□ 0.26
Chd1P40201 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Zkscan7-205ENSMUST00000216462 990 ntBASIC16.65■□□□□ 0.26
Chd1P40201 AC161581.1-201ENSMUST00000228696 318 ntBASIC16.65■□□□□ 0.26
Chd1P40201 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chd1P40201 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.65■□□□□ 0.26
Chd1P40201 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC16.65■□□□□ 0.26
Chd1P40201 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Gm4996-201ENSMUST00000122042 784 ntBASIC16.65■□□□□ 0.26
Chd1P40201 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC16.65■□□□□ 0.26
Chd1P40201 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC16.65■□□□□ 0.26
Chd1P40201 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1P40201 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms