Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC164978.2-201ENSMUST00000226645 857 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col18a1P39061 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col18a1P39061 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Gm11231-201ENSMUST00000117895 1706 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col18a1P39061 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Col18a1P39061 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.69□□□□□ -0.06
Col18a1P39061 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC14.69□□□□□ -0.06
Col18a1P39061 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col18a1P39061 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC14.69□□□□□ -0.06
Col18a1P39061 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC14.69□□□□□ -0.06
Col18a1P39061 Gm15664-201ENSMUST00000160167 184 ntBASIC14.69□□□□□ -0.06
Col18a1P39061 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Col18a1P39061 Scgb1b21-201ENSMUST00000170232 268 ntBASIC14.69□□□□□ -0.06
Col18a1P39061 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC14.69□□□□□ -0.06
Col18a1P39061 Mir6981-201ENSMUST00000184293 115 ntBASIC14.69□□□□□ -0.06
Col18a1P39061 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC14.69□□□□□ -0.06
Col18a1P39061 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC14.69□□□□□ -0.06
Col18a1P39061 Gm45225-201ENSMUST00000206852 1139 ntBASIC14.69□□□□□ -0.06
Col18a1P39061 Gm44716-201ENSMUST00000209007 710 ntBASIC14.69□□□□□ -0.06
Col18a1P39061 Gm6426-201ENSMUST00000209048 854 ntBASIC14.69□□□□□ -0.06
Col18a1P39061 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 AC154461.3-201ENSMUST00000224831 573 ntBASIC14.69□□□□□ -0.06
Col18a1P39061 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col18a1P39061 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Col18a1P39061 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col18a1P39061 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC14.68□□□□□ -0.06
Col18a1P39061 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC14.68□□□□□ -0.06
Col18a1P39061 Gm15661-201ENSMUST00000117390 556 ntBASIC14.68□□□□□ -0.06
Col18a1P39061 Gm23521-201ENSMUST00000177845 110 ntBASIC14.68□□□□□ -0.06
Col18a1P39061 Gm28746-201ENSMUST00000187453 380 ntBASIC14.68□□□□□ -0.06
Col18a1P39061 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC14.68□□□□□ -0.06
Col18a1P39061 CR974487.1-201ENSMUST00000220984 413 ntBASIC14.68□□□□□ -0.06
Col18a1P39061 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC14.68□□□□□ -0.06
Col18a1P39061 Zfp389-202ENSMUST00000224437 1234 ntBASIC14.68□□□□□ -0.06
Col18a1P39061 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 AC154640.1-203ENSMUST00000228316 1618 ntBASIC14.68□□□□□ -0.06
Col18a1P39061 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col18a1P39061 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col18a1P39061 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Col18a1P39061 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Gm44755-201ENSMUST00000207830 2102 ntBASIC14.68□□□□□ -0.06
Col18a1P39061 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Gm13169-201ENSMUST00000122090 1459 ntBASIC14.68□□□□□ -0.06
Col18a1P39061 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Col18a1P39061 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.68□□□□□ -0.06
Col18a1P39061 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC14.68□□□□□ -0.06
Col18a1P39061 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col18a1P39061 Ly6c1-206ENSMUST00000188845 784 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Col18a1P39061 Gm38301-201ENSMUST00000195573 543 ntBASIC14.68□□□□□ -0.06
Col18a1P39061 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.67□□□□□ -0.06
Col18a1P39061 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Paupar-201ENSMUST00000194826 3482 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.67□□□□□ -0.06
Col18a1P39061 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Col18a1P39061 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms