Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox5P35710 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Gm23949-201ENSMUST00000104027 127 ntBASIC12.41□□□□□ -0.42
Sox5P35710 Gm12380-201ENSMUST00000119012 544 ntBASIC12.41□□□□□ -0.42
Sox5P35710 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.41□□□□□ -0.42
Sox5P35710 Gm8815-201ENSMUST00000173809 620 ntBASIC12.41□□□□□ -0.42
Sox5P35710 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Gm28071-201ENSMUST00000190355 478 ntBASIC12.41□□□□□ -0.42
Sox5P35710 Gm37259-201ENSMUST00000193903 849 ntBASIC12.41□□□□□ -0.42
Sox5P35710 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.41□□□□□ -0.42
Sox5P35710 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.41□□□□□ -0.42
Sox5P35710 Gm6722-201ENSMUST00000221586 390 ntBASIC12.41□□□□□ -0.42
Sox5P35710 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sox5P35710 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.41□□□□□ -0.42
Sox5P35710 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.41□□□□□ -0.42
Sox5P35710 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox5P35710 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sox5P35710 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.41□□□□□ -0.42
Sox5P35710 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox5P35710 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Sox5P35710 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sox5P35710 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox5P35710 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Sox5P35710 Gm15711-201ENSMUST00000118889 535 ntBASIC12.4□□□□□ -0.42
Sox5P35710 Gm8566-201ENSMUST00000120174 465 ntBASIC12.4□□□□□ -0.42
Sox5P35710 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.4□□□□□ -0.42
Sox5P35710 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox5P35710 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox5P35710 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.4□□□□□ -0.42
Sox5P35710 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.4□□□□□ -0.42
Sox5P35710 Gm19891-201ENSMUST00000189771 303 ntBASIC12.4□□□□□ -0.42
Sox5P35710 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Gm45433-201ENSMUST00000209386 247 ntBASIC12.4□□□□□ -0.42
Sox5P35710 Gm45575-201ENSMUST00000210283 548 ntBASIC12.4□□□□□ -0.42
Sox5P35710 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.4□□□□□ -0.42
Sox5P35710 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.4□□□□□ -0.42
Sox5P35710 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Sox5P35710 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox5P35710 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox5P35710 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox5P35710 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sox5P35710 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox5P35710 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox5P35710 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox5P35710 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sox5P35710 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox5P35710 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox5P35710 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.39□□□□□ -0.43
Sox5P35710 Gm24749-201ENSMUST00000157838 343 ntBASIC12.39□□□□□ -0.43
Sox5P35710 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox5P35710 Gm16505-201ENSMUST00000179981 232 ntBASIC12.39□□□□□ -0.43
Sox5P35710 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sox5P35710 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms