Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sftpa1P35242 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sftpa1P35242 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sftpa1P35242 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Sftpa1P35242 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.52□□□□□ -0.72
Sftpa1P35242 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sftpa1P35242 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sftpa1P35242 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sftpa1P35242 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sftpa1P35242 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Sftpa1P35242 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm24279-201ENSMUST00000104236 131 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm9133-201ENSMUST00000118289 540 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sftpa1P35242 Mir432-201ENSMUST00000157230 75 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm27956-201ENSMUST00000175604 260 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm31274-201ENSMUST00000197356 229 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm4903-201ENSMUST00000210462 405 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm9102-201ENSMUST00000219250 465 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm5449-201ENSMUST00000081132 357 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Sftpa1P35242 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Sftpa1P35242 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sftpa1P35242 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
Sftpa1P35242 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sftpa1P35242 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.52□□□□□ -0.73
Sftpa1P35242 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sftpa1P35242 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Sftpa1P35242 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.51□□□□□ -0.73
Sftpa1P35242 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.51□□□□□ -0.73
Sftpa1P35242 Gm14005-210ENSMUST00000225087 1413 ntBASIC10.51□□□□□ -0.73
Sftpa1P35242 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Sftpa1P35242 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Gm15136-201ENSMUST00000120552 533 ntBASIC10.51□□□□□ -0.73
Sftpa1P35242 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 Gm9372-201ENSMUST00000168454 430 ntBASIC10.51□□□□□ -0.73
Sftpa1P35242 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sftpa1P35242 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms