Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 Gm12501-201ENSMUST00000119163 529 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 Gm11941-201ENSMUST00000119904 610 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 Mir6958-201ENSMUST00000184207 73 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 Gm6439-201ENSMUST00000199849 862 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Gm8285-201ENSMUST00000208293 759 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Gm5369-201ENSMUST00000217499 588 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.82□□□□□ -0.68
Slc6a11P31650 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Slc6a11P31650 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc6a11P31650 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc6a11P31650 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Slc6a11P31650 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Slc6a11P31650 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm28937-201ENSMUST00000185413 695 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm29400-201ENSMUST00000187208 695 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm28662-201ENSMUST00000188446 695 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm28251-201ENSMUST00000188835 695 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm37318-201ENSMUST00000194325 695 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm38017-201ENSMUST00000194768 695 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm37287-201ENSMUST00000195449 695 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm37793-201ENSMUST00000195548 695 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm43966-201ENSMUST00000203301 612 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc6a11P31650 CT025551.1-201ENSMUST00000223996 692 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm1821-202ENSMUST00000227415 750 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Slc6a11P31650 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Slc6a11P31650 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.81□□□□□ -0.68
Slc6a11P31650 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms