Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.43□□□□□ -0.58
RxrbP28704 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RxrbP28704 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RxrbP28704 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RxrbP28704 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.43□□□□□ -0.58
RxrbP28704 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RxrbP28704 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC11.43□□□□□ -0.58
RxrbP28704 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.42□□□□□ -0.58
RxrbP28704 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.42□□□□□ -0.58
RxrbP28704 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.42□□□□□ -0.58
RxrbP28704 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
RxrbP28704 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Gm23061-201ENSMUST00000102348 116 ntBASIC11.42□□□□□ -0.58
RxrbP28704 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
RxrbP28704 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
RxrbP28704 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Gm4857-201ENSMUST00000192718 785 ntBASIC11.42□□□□□ -0.58
RxrbP28704 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.42□□□□□ -0.58
RxrbP28704 Gm44008-201ENSMUST00000204345 412 ntBASIC11.42□□□□□ -0.58
RxrbP28704 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.42□□□□□ -0.58
RxrbP28704 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.42□□□□□ -0.58
RxrbP28704 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.42□□□□□ -0.58
RxrbP28704 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.42□□□□□ -0.58
RxrbP28704 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
RxrbP28704 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Gm5455-201ENSMUST00000058710 715 ntBASIC11.42□□□□□ -0.58
RxrbP28704 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.42□□□□□ -0.58
RxrbP28704 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.42□□□□□ -0.58
RxrbP28704 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 AA474408-201ENSMUST00000098110 3339 ntBASIC11.42□□□□□ -0.58
RxrbP28704 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrbP28704 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RxrbP28704 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.41□□□□□ -0.58
RxrbP28704 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.41□□□□□ -0.58
RxrbP28704 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RxrbP28704 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RxrbP28704 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RxrbP28704 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RxrbP28704 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.41□□□□□ -0.58
RxrbP28704 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Gm26286-201ENSMUST00000104166 134 ntBASIC11.41□□□□□ -0.58
RxrbP28704 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
RxrbP28704 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.41□□□□□ -0.58
RxrbP28704 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.41□□□□□ -0.58
RxrbP28704 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
RxrbP28704 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.41□□□□□ -0.58
RxrbP28704 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.41□□□□□ -0.58
RxrbP28704 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.41□□□□□ -0.58
RxrbP28704 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
RxrbP28704 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
RxrbP28704 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RxrbP28704 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms