Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.37□□□□□ -0.59
Nckap1P28660 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nckap1P28660 Gm23694-201ENSMUST00000179335 110 ntBASIC11.37□□□□□ -0.59
Nckap1P28660 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.37□□□□□ -0.59
Nckap1P28660 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.37□□□□□ -0.59
Nckap1P28660 Mir7051-201ENSMUST00000184167 73 ntBASIC11.37□□□□□ -0.59
Nckap1P28660 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.37□□□□□ -0.59
Nckap1P28660 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.37□□□□□ -0.59
Nckap1P28660 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nckap1P28660 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.37□□□□□ -0.59
Nckap1P28660 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.37□□□□□ -0.59
Nckap1P28660 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.37□□□□□ -0.59
Nckap1P28660 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.37□□□□□ -0.59
Nckap1P28660 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.37□□□□□ -0.59
Nckap1P28660 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nckap1P28660 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nckap1P28660 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.37□□□□□ -0.59
Nckap1P28660 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Nckap1P28660 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nckap1P28660 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nckap1P28660 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nckap1P28660 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nckap1P28660 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nckap1P28660 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nckap1P28660 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nckap1P28660 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nckap1P28660 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nckap1P28660 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nckap1P28660 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nckap1P28660 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nckap1P28660 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Nckap1P28660 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.36□□□□□ -0.59
Nckap1P28660 Gm8302-201ENSMUST00000119217 852 ntBASIC11.36□□□□□ -0.59
Nckap1P28660 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.36□□□□□ -0.59
Nckap1P28660 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.36□□□□□ -0.59
Nckap1P28660 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.36□□□□□ -0.59
Nckap1P28660 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.36□□□□□ -0.59
Nckap1P28660 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.36□□□□□ -0.59
Nckap1P28660 Gm3726-201ENSMUST00000203110 785 ntBASIC11.36□□□□□ -0.59
Nckap1P28660 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Gm3619-201ENSMUST00000219947 775 ntBASIC11.36□□□□□ -0.59
Nckap1P28660 Gm6722-201ENSMUST00000221586 390 ntBASIC11.36□□□□□ -0.59
Nckap1P28660 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.36□□□□□ -0.59
Nckap1P28660 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.36□□□□□ -0.59
Nckap1P28660 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Gm5805-201ENSMUST00000072779 456 ntBASIC11.36□□□□□ -0.59
Nckap1P28660 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nckap1P28660 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.36□□□□□ -0.59
Nckap1P28660 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.36□□□□□ -0.59
Nckap1P28660 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nckap1P28660 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nckap1P28660 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.36□□□□□ -0.59
Nckap1P28660 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nckap1P28660 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nckap1P28660 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nckap1P28660 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Nckap1P28660 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.35□□□□□ -0.59
Nckap1P28660 Gm12030-201ENSMUST00000121917 223 ntBASIC11.35□□□□□ -0.59
Nckap1P28660 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.35□□□□□ -0.59
Nckap1P28660 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.35□□□□□ -0.59
Nckap1P28660 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.35□□□□□ -0.59
Nckap1P28660 Gm25492-201ENSMUST00000157383 129 ntBASIC11.35□□□□□ -0.59
Nckap1P28660 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nckap1P28660 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Nckap1P28660 Gm43163-201ENSMUST00000196571 442 ntBASIC11.35□□□□□ -0.59
Nckap1P28660 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Nckap1P28660 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.35□□□□□ -0.59
Nckap1P28660 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nckap1P28660 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms