Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.76□□□□□ -0.37
Col2a1P28481 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col2a1P28481 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.76□□□□□ -0.37
Col2a1P28481 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.76□□□□□ -0.37
Col2a1P28481 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col2a1P28481 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.76□□□□□ -0.37
Col2a1P28481 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.76□□□□□ -0.37
Col2a1P28481 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.76□□□□□ -0.37
Col2a1P28481 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.76□□□□□ -0.37
Col2a1P28481 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC12.76□□□□□ -0.37
Col2a1P28481 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Gm18801-201ENSMUST00000186616 536 ntBASIC12.76□□□□□ -0.37
Col2a1P28481 Gm37852-201ENSMUST00000193027 350 ntBASIC12.76□□□□□ -0.37
Col2a1P28481 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.76□□□□□ -0.37
Col2a1P28481 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.76□□□□□ -0.37
Col2a1P28481 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.76□□□□□ -0.37
Col2a1P28481 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.76□□□□□ -0.37
Col2a1P28481 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col2a1P28481 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.76□□□□□ -0.37
Col2a1P28481 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col2a1P28481 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.76□□□□□ -0.37
Col2a1P28481 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col2a1P28481 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col2a1P28481 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.75□□□□□ -0.37
Col2a1P28481 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col2a1P28481 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.75□□□□□ -0.37
Col2a1P28481 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col2a1P28481 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Col2a1P28481 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Col2a1P28481 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Col2a1P28481 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col2a1P28481 Mir671-201ENSMUST00000102432 98 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 Gm12745-201ENSMUST00000121767 214 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col2a1P28481 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC12.75□□□□□ -0.37
Col2a1P28481 Gm9162-201ENSMUST00000182081 991 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.75□□□□□ -0.37
Col2a1P28481 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Gm45258-201ENSMUST00000210042 853 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.75□□□□□ -0.37
Col2a1P28481 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 AC153524.2-202ENSMUST00000220401 1794 ntBASIC12.75□□□□□ -0.37
Col2a1P28481 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col2a1P28481 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col2a1P28481 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col2a1P28481 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Col2a1P28481 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.74□□□□□ -0.37
Col2a1P28481 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col2a1P28481 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.74□□□□□ -0.37
Col2a1P28481 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col2a1P28481 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms