Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pde6aP27664 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.18□□□□□ -0.3
Pde6aP27664 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pde6aP27664 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.18□□□□□ -0.3
Pde6aP27664 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pde6aP27664 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Pde6aP27664 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.18□□□□□ -0.3
Pde6aP27664 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pde6aP27664 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pde6aP27664 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pde6aP27664 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
Pde6aP27664 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6aP27664 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6aP27664 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Gm14263-201ENSMUST00000117955 746 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm12616-201ENSMUST00000118594 382 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm13422-201ENSMUST00000118834 504 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm12029-201ENSMUST00000120073 832 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm19246-201ENSMUST00000173599 255 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm12624-201ENSMUST00000177615 382 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm12621-201ENSMUST00000177760 382 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm12615-201ENSMUST00000177970 382 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm12622-201ENSMUST00000177975 382 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm12627-201ENSMUST00000178412 382 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm12625-201ENSMUST00000179122 382 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm12614-201ENSMUST00000179586 382 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm12613-201ENSMUST00000180323 382 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.17□□□□□ -0.3
Pde6aP27664 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.17□□□□□ -0.3
Pde6aP27664 Gm43058-201ENSMUST00000197645 625 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Gm8285-201ENSMUST00000208293 759 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.17□□□□□ -0.3
Pde6aP27664 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pde6aP27664 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pde6aP27664 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pde6aP27664 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pde6aP27664 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pde6aP27664 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Pde6aP27664 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6aP27664 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Pde6aP27664 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pde6aP27664 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pde6aP27664 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6aP27664 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Pde6aP27664 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pde6aP27664 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.16□□□□□ -0.3
Pde6aP27664 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.16□□□□□ -0.3
Pde6aP27664 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6aP27664 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.16□□□□□ -0.3
Pde6aP27664 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6aP27664 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.16□□□□□ -0.3
Pde6aP27664 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pde6aP27664 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.16□□□□□ -0.3
Pde6aP27664 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.16□□□□□ -0.3
Pde6aP27664 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.16□□□□□ -0.3
Pde6aP27664 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pde6aP27664 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.16□□□□□ -0.3
Pde6aP27664 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pde6aP27664 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pde6aP27664 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pde6aP27664 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pde6aP27664 Gm7467-201ENSMUST00000185173 652 ntBASIC13.16□□□□□ -0.3
Pde6aP27664 Gm6439-201ENSMUST00000199849 862 ntBASIC13.16□□□□□ -0.3
Pde6aP27664 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.16□□□□□ -0.3
Pde6aP27664 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.16□□□□□ -0.3
Pde6aP27664 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Pde6aP27664 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6aP27664 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6aP27664 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pde6aP27664 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.16□□□□□ -0.3
Pde6aP27664 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6aP27664 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.16□□□□□ -0.3
Pde6aP27664 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6aP27664 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms