Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Col8a2P25318 Gm4294-201ENSMUST00000105169 614 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.48□□□□□ -0.89
Col8a2P25318 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.48□□□□□ -0.89
Col8a2P25318 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 Gm12218-201ENSMUST00000117666 399 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 Gm15528-201ENSMUST00000117821 864 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 Gm12990-201ENSMUST00000120372 468 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC9.48□□□□□ -0.89
Col8a2P25318 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 Gm38210-201ENSMUST00000191944 809 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 Gm44323-201ENSMUST00000198689 129 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 Gm39288-201ENSMUST00000210554 446 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 Gm9139-201ENSMUST00000218817 700 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Col8a2P25318 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Col8a2P25318 n-R5s185-201ENSMUST00000083953 119 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.48□□□□□ -0.89
Col8a2P25318 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.48□□□□□ -0.89
Col8a2P25318 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.48□□□□□ -0.89
Col8a2P25318 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.48□□□□□ -0.89
Col8a2P25318 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Col8a2P25318 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Col8a2P25318 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Col8a2P25318 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Col8a2P25318 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col8a2P25318 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.48□□□□□ -0.89
Col8a2P25318 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.47□□□□□ -0.89
Col8a2P25318 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Col8a2P25318 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Col8a2P25318 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Col8a2P25318 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Col8a2P25318 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.47□□□□□ -0.89
Col8a2P25318 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Col8a2P25318 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Col8a2P25318 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Col8a2P25318 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Gm4879-201ENSMUST00000122190 1272 ntBASIC9.47□□□□□ -0.89
Col8a2P25318 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.47□□□□□ -0.89
Col8a2P25318 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Col8a2P25318 Gm3329-201ENSMUST00000159873 556 ntBASIC9.47□□□□□ -0.89
Col8a2P25318 Gm25072-201ENSMUST00000175233 235 ntBASIC9.47□□□□□ -0.89
Col8a2P25318 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.47□□□□□ -0.89
Col8a2P25318 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.47□□□□□ -0.89
Col8a2P25318 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Col8a2P25318 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.47□□□□□ -0.89
Col8a2P25318 Gm43380-201ENSMUST00000200421 220 ntBASIC9.47□□□□□ -0.89
Col8a2P25318 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.47□□□□□ -0.89
Col8a2P25318 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.47□□□□□ -0.89
Col8a2P25318 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Col8a2P25318 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Col8a2P25318 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Col8a2P25318 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Col8a2P25318 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Col8a2P25318 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.47□□□□□ -0.89
Col8a2P25318 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col8a2P25318 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.47□□□□□ -0.89
Col8a2P25318 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms