Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm9550-201ENSMUST00000161130 862 ntBASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm21092-201ENSMUST00000178995 955 ntBASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm44315-201ENSMUST00000203041 219 ntBASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm43916-201ENSMUST00000205062 967 ntBASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfrsf1bP25119 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm15615-201ENSMUST00000118876 198 ntBASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm14585-201ENSMUST00000120713 634 ntBASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm16107-201ENSMUST00000162523 862 ntBASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm3786-201ENSMUST00000202659 378 ntBASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm45071-201ENSMUST00000205353 571 ntBASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 AC102542.1-201ENSMUST00000225204 1138 ntBASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm8420-201ENSMUST00000097103 598 ntBASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm43435-201ENSMUST00000199996 1438 ntBASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms