Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Hmgn1P18608 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.38□□□□□ -0.75
Hmgn1P18608 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.38□□□□□ -0.75
Hmgn1P18608 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Mir1896-201ENSMUST00000122641 81 ntBASIC10.37□□□□□ -0.75
Hmgn1P18608 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.37□□□□□ -0.75
Hmgn1P18608 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hmgn1P18608 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Gm10807-201ENSMUST00000177134 795 ntBASIC10.37□□□□□ -0.75
Hmgn1P18608 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.37□□□□□ -0.75
Hmgn1P18608 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.37□□□□□ -0.75
Hmgn1P18608 Gm42867-201ENSMUST00000202995 469 ntBASIC10.37□□□□□ -0.75
Hmgn1P18608 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Gm9823-201ENSMUST00000051212 327 ntBASIC10.37□□□□□ -0.75
Hmgn1P18608 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hmgn1P18608 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hmgn1P18608 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Hmgn1P18608 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.36□□□□□ -0.75
Hmgn1P18608 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.36□□□□□ -0.75
Hmgn1P18608 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.36□□□□□ -0.75
Hmgn1P18608 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Gm13296-201ENSMUST00000117854 997 ntBASIC10.36□□□□□ -0.75
Hmgn1P18608 Gm12241-201ENSMUST00000118330 726 ntBASIC10.36□□□□□ -0.75
Hmgn1P18608 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.36□□□□□ -0.75
Hmgn1P18608 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hmgn1P18608 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.36□□□□□ -0.75
Hmgn1P18608 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.36□□□□□ -0.75
Hmgn1P18608 Gm45113-201ENSMUST00000207518 165 ntBASIC10.36□□□□□ -0.75
Hmgn1P18608 Gm18054-201ENSMUST00000207539 555 ntBASIC10.36□□□□□ -0.75
Hmgn1P18608 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Hmgn1P18608 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.36□□□□□ -0.75
Hmgn1P18608 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hmgn1P18608 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.36□□□□□ -0.75
Hmgn1P18608 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms