Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ccl3P10855 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Ccl3P10855 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Ccl3P10855 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.04□□□□□ -0.8
Ccl3P10855 Gm12906-201ENSMUST00000154610 441 ntBASIC10.04□□□□□ -0.8
Ccl3P10855 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Gm5529-201ENSMUST00000165691 891 ntBASIC10.04□□□□□ -0.8
Ccl3P10855 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ccl3P10855 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ccl3P10855 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ccl3P10855 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.04□□□□□ -0.8
Ccl3P10855 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.04□□□□□ -0.8
Ccl3P10855 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.04□□□□□ -0.8
Ccl3P10855 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.04□□□□□ -0.8
Ccl3P10855 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.04□□□□□ -0.8
Ccl3P10855 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ccl3P10855 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.04□□□□□ -0.8
Ccl3P10855 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.04□□□□□ -0.8
Ccl3P10855 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ccl3P10855 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ccl3P10855 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Ccl3P10855 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.03□□□□□ -0.8
Ccl3P10855 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Ccl3P10855 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ccl3P10855 Gm22937-201ENSMUST00000103954 131 ntBASIC10.03□□□□□ -0.8
Ccl3P10855 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Ccl3P10855 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Ccl3P10855 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Ccl3P10855 Gm4917-201ENSMUST00000121452 650 ntBASIC10.03□□□□□ -0.8
Ccl3P10855 Gm11993-201ENSMUST00000121861 820 ntBASIC10.03□□□□□ -0.8
Ccl3P10855 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.03□□□□□ -0.8
Ccl3P10855 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.03□□□□□ -0.8
Ccl3P10855 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.03□□□□□ -0.8
Ccl3P10855 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Ccl3P10855 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Gm25604-201ENSMUST00000158359 133 ntBASIC10.03□□□□□ -0.8
Ccl3P10855 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.03□□□□□ -0.8
Ccl3P10855 Gm43966-201ENSMUST00000203301 612 ntBASIC10.03□□□□□ -0.8
Ccl3P10855 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.03□□□□□ -0.8
Ccl3P10855 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ccl3P10855 Gm5178-201ENSMUST00000219380 898 ntBASIC10.03□□□□□ -0.8
Ccl3P10855 Lect2-202ENSMUST00000225183 823 ntBASIC10.03□□□□□ -0.8
Ccl3P10855 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.03□□□□□ -0.8
Ccl3P10855 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.03□□□□□ -0.8
Ccl3P10855 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.03□□□□□ -0.8
Ccl3P10855 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.03□□□□□ -0.8
Ccl3P10855 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.03□□□□□ -0.8
Ccl3P10855 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl3P10855 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl3P10855 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms