Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxa4P06798 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa4P06798 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.22□□□□□ -0.61
Hoxa4P06798 Gm25766-201ENSMUST00000104101 131 ntBASIC11.22□□□□□ -0.61
Hoxa4P06798 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Hoxa4P06798 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxa4P06798 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.22□□□□□ -0.61
Hoxa4P06798 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.22□□□□□ -0.61
Hoxa4P06798 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa4P06798 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa4P06798 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.22□□□□□ -0.61
Hoxa4P06798 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxa4P06798 Gm43163-201ENSMUST00000196571 442 ntBASIC11.22□□□□□ -0.61
Hoxa4P06798 Gm6439-201ENSMUST00000199849 862 ntBASIC11.22□□□□□ -0.61
Hoxa4P06798 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxa4P06798 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.22□□□□□ -0.61
Hoxa4P06798 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.22□□□□□ -0.61
Hoxa4P06798 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.22□□□□□ -0.61
Hoxa4P06798 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.22□□□□□ -0.61
Hoxa4P06798 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa4P06798 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa4P06798 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxa4P06798 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.21□□□□□ -0.61
Hoxa4P06798 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Gm14892-201ENSMUST00000117636 267 ntBASIC11.21□□□□□ -0.61
Hoxa4P06798 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Gm1848-201ENSMUST00000120711 789 ntBASIC11.21□□□□□ -0.61
Hoxa4P06798 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Gm24514-201ENSMUST00000174961 285 ntBASIC11.21□□□□□ -0.61
Hoxa4P06798 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Gm44551-201ENSMUST00000208804 171 ntBASIC11.21□□□□□ -0.61
Hoxa4P06798 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.21□□□□□ -0.61
Hoxa4P06798 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.21□□□□□ -0.61
Hoxa4P06798 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxa4P06798 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa4P06798 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.21□□□□□ -0.62
Hoxa4P06798 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.21□□□□□ -0.62
Hoxa4P06798 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa4P06798 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa4P06798 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Hoxa4P06798 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.21□□□□□ -0.62
Hoxa4P06798 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa4P06798 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Hoxa4P06798 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa4P06798 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Hoxa4P06798 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa4P06798 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa4P06798 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Hoxa4P06798 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Hoxa4P06798 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa4P06798 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa4P06798 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa4P06798 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa4P06798 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa4P06798 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.2□□□□□ -0.62
Hoxa4P06798 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.2□□□□□ -0.62
Hoxa4P06798 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Hoxa4P06798 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa4P06798 Snord17-201ENSMUST00000104526 238 ntBASIC11.2□□□□□ -0.62
Hoxa4P06798 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.2□□□□□ -0.62
Hoxa4P06798 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa4P06798 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.2□□□□□ -0.62
Hoxa4P06798 Gm12176-201ENSMUST00000121420 875 ntBASIC11.2□□□□□ -0.62
Hoxa4P06798 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms