Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Gm7857-201ENSMUST00000117957 358 ntBASIC11.98□□□□□ -0.49
Ifnb1P01575 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Gm24844-201ENSMUST00000158679 127 ntBASIC11.98□□□□□ -0.49
Ifnb1P01575 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ifnb1P01575 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ifnb1P01575 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ifnb1P01575 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ifnb1P01575 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ifnb1P01575 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm12997-201ENSMUST00000120207 640 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm15329-201ENSMUST00000121408 155 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm15549-201ENSMUST00000121595 622 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm44506-201ENSMUST00000206278 965 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm17825-201ENSMUST00000206836 794 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.97□□□□□ -0.49
Ifnb1P01575 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.97□□□□□ -0.49
Ifnb1P01575 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ifnb1P01575 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ifnb1P01575 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.97□□□□□ -0.49
Ifnb1P01575 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.97□□□□□ -0.49
Ifnb1P01575 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifnb1P01575 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.96□□□□□ -0.49
Ifnb1P01575 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.96□□□□□ -0.49
Ifnb1P01575 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifnb1P01575 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ifnb1P01575 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ifnb1P01575 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ifnb1P01575 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms