Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hcn1O88704 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Gm24891-201ENSMUST00000104391 136 ntBASIC10.92□□□□□ -0.66
Hcn1O88704 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Hcn1O88704 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
Hcn1O88704 Gm8199-201ENSMUST00000121323 823 ntBASIC10.92□□□□□ -0.66
Hcn1O88704 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 Gm4310-201ENSMUST00000177847 889 ntBASIC10.92□□□□□ -0.66
Hcn1O88704 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hcn1O88704 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Gm43378-201ENSMUST00000199336 582 ntBASIC10.92□□□□□ -0.66
Hcn1O88704 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Hcn1O88704 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.92□□□□□ -0.66
Hcn1O88704 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.92□□□□□ -0.66
Hcn1O88704 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Nsd1-205ENSMUST00000224693 852 ntBASIC10.92□□□□□ -0.66
Hcn1O88704 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.92□□□□□ -0.66
Hcn1O88704 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Hcn1O88704 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.91□□□□□ -0.66
Hcn1O88704 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hcn1O88704 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hcn1O88704 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hcn1O88704 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hcn1O88704 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hcn1O88704 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hcn1O88704 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Hcn1O88704 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.91□□□□□ -0.66
Hcn1O88704 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hcn1O88704 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.91□□□□□ -0.66
Hcn1O88704 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hcn1O88704 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Gm38117-201ENSMUST00000194653 939 ntBASIC10.91□□□□□ -0.66
Hcn1O88704 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Spcs1-203ENSMUST00000226374 592 ntBASIC10.91□□□□□ -0.66
Hcn1O88704 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hcn1O88704 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Hcn1O88704 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.91□□□□□ -0.66
Hcn1O88704 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.91□□□□□ -0.66
Hcn1O88704 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hcn1O88704 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.91□□□□□ -0.66
Hcn1O88704 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.9□□□□□ -0.66
Hcn1O88704 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Hcn1O88704 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.9□□□□□ -0.66
Hcn1O88704 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Hcn1O88704 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hcn1O88704 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms