Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pknox1O70477 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.3□□□□□ -0.6
Pknox1O70477 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pknox1O70477 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.3□□□□□ -0.6
Pknox1O70477 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.3□□□□□ -0.6
Pknox1O70477 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pknox1O70477 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Pknox1O70477 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pknox1O70477 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pknox1O70477 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Pknox1O70477 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pknox1O70477 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pknox1O70477 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pknox1O70477 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.29□□□□□ -0.6
Pknox1O70477 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.29□□□□□ -0.6
Pknox1O70477 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pknox1O70477 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.29□□□□□ -0.6
Pknox1O70477 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.29□□□□□ -0.6
Pknox1O70477 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.29□□□□□ -0.6
Pknox1O70477 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pknox1O70477 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Pknox1O70477 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.29□□□□□ -0.6
Pknox1O70477 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.29□□□□□ -0.6
Pknox1O70477 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Gm6108-201ENSMUST00000208365 367 ntBASIC11.29□□□□□ -0.6
Pknox1O70477 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.29□□□□□ -0.6
Pknox1O70477 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.29□□□□□ -0.6
Pknox1O70477 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.29□□□□□ -0.6
Pknox1O70477 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pknox1O70477 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pknox1O70477 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pknox1O70477 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pknox1O70477 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.28□□□□□ -0.6
Pknox1O70477 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pknox1O70477 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.28□□□□□ -0.6
Pknox1O70477 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pknox1O70477 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pknox1O70477 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pknox1O70477 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pknox1O70477 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.28□□□□□ -0.6
Pknox1O70477 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.28□□□□□ -0.6
Pknox1O70477 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.28□□□□□ -0.6
Pknox1O70477 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.28□□□□□ -0.6
Pknox1O70477 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Pknox1O70477 Gm25881-201ENSMUST00000157783 103 ntBASIC11.28□□□□□ -0.6
Pknox1O70477 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pknox1O70477 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.28□□□□□ -0.6
Pknox1O70477 Gm8100-201ENSMUST00000182906 988 ntBASIC11.28□□□□□ -0.6
Pknox1O70477 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.28□□□□□ -0.6
Pknox1O70477 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.28□□□□□ -0.6
Pknox1O70477 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pknox1O70477 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.28□□□□□ -0.6
Pknox1O70477 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms