Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.53□□□□□ -0.4
Trdmt1O55055 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.53□□□□□ -0.4
Trdmt1O55055 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trdmt1O55055 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trdmt1O55055 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.53□□□□□ -0.4
Trdmt1O55055 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trdmt1O55055 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trdmt1O55055 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.53□□□□□ -0.4
Trdmt1O55055 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Gm31274-201ENSMUST00000197356 229 ntBASIC12.53□□□□□ -0.4
Trdmt1O55055 Gm42867-201ENSMUST00000202995 469 ntBASIC12.53□□□□□ -0.4
Trdmt1O55055 Gm45085-201ENSMUST00000209100 441 ntBASIC12.53□□□□□ -0.4
Trdmt1O55055 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Gm5178-201ENSMUST00000219380 898 ntBASIC12.53□□□□□ -0.4
Trdmt1O55055 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trdmt1O55055 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Trdmt1O55055 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trdmt1O55055 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.53□□□□□ -0.4
Trdmt1O55055 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.53□□□□□ -0.4
Trdmt1O55055 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.53□□□□□ -0.4
Trdmt1O55055 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdmt1O55055 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trdmt1O55055 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.52□□□□□ -0.4
Trdmt1O55055 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trdmt1O55055 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trdmt1O55055 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trdmt1O55055 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trdmt1O55055 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trdmt1O55055 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trdmt1O55055 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.52□□□□□ -0.4
Trdmt1O55055 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trdmt1O55055 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.52□□□□□ -0.4
Trdmt1O55055 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trdmt1O55055 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trdmt1O55055 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trdmt1O55055 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Gm11952-201ENSMUST00000121172 821 ntBASIC12.52□□□□□ -0.41
Trdmt1O55055 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.52□□□□□ -0.41
Trdmt1O55055 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.52□□□□□ -0.41
Trdmt1O55055 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.52□□□□□ -0.41
Trdmt1O55055 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.52□□□□□ -0.41
Trdmt1O55055 Gm9353-201ENSMUST00000200472 604 ntBASIC12.52□□□□□ -0.41
Trdmt1O55055 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.52□□□□□ -0.41
Trdmt1O55055 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.52□□□□□ -0.41
Trdmt1O55055 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Trdmt1O55055 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.52□□□□□ -0.41
Trdmt1O55055 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trdmt1O55055 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdmt1O55055 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms