Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cxcl13O55038 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Erich3-203ENSMUST00000189969 3460 ntBASIC9.62□□□□□ -0.87
Cxcl13O55038 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.62□□□□□ -0.87
Cxcl13O55038 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC9.62□□□□□ -0.87
Cxcl13O55038 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC9.62□□□□□ -0.87
Cxcl13O55038 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Gm19166-201ENSMUST00000196041 1063 ntBASIC9.62□□□□□ -0.87
Cxcl13O55038 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.62□□□□□ -0.87
Cxcl13O55038 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.62□□□□□ -0.87
Cxcl13O55038 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cxcl13O55038 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.61□□□□□ -0.87
Cxcl13O55038 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Gm22877-201ENSMUST00000175451 105 ntBASIC9.61□□□□□ -0.87
Cxcl13O55038 Gm6771-201ENSMUST00000182716 1001 ntBASIC9.61□□□□□ -0.87
Cxcl13O55038 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.61□□□□□ -0.87
Cxcl13O55038 Gm9353-201ENSMUST00000200472 604 ntBASIC9.61□□□□□ -0.87
Cxcl13O55038 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms