Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf13O54965 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf13O54965 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf13O54965 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf13O54965 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.3□□□□□ -0.76
Rnf13O54965 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf13O54965 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf13O54965 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf13O54965 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Rnf13O54965 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf13O54965 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf13O54965 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf13O54965 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf13O54965 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Rnf13O54965 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Rnf13O54965 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Rnf13O54965 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.29□□□□□ -0.76
Rnf13O54965 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
Rnf13O54965 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.29□□□□□ -0.76
Rnf13O54965 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Gm44008-201ENSMUST00000204345 412 ntBASIC10.29□□□□□ -0.76
Rnf13O54965 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.29□□□□□ -0.76
Rnf13O54965 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.29□□□□□ -0.76
Rnf13O54965 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.29□□□□□ -0.76
Rnf13O54965 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.29□□□□□ -0.76
Rnf13O54965 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.29□□□□□ -0.76
Rnf13O54965 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rnf13O54965 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.29□□□□□ -0.76
Rnf13O54965 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.29□□□□□ -0.76
Rnf13O54965 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.29□□□□□ -0.76
Rnf13O54965 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Rnf13O54965 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.29□□□□□ -0.76
Rnf13O54965 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.29□□□□□ -0.76
Rnf13O54965 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf13O54965 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.28□□□□□ -0.76
Rnf13O54965 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rnf13O54965 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rnf13O54965 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Rnf13O54965 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.28□□□□□ -0.76
Rnf13O54965 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rnf13O54965 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Gm22133-201ENSMUST00000102082 109 ntBASIC10.28□□□□□ -0.76
Rnf13O54965 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Gm13296-201ENSMUST00000117854 997 ntBASIC10.28□□□□□ -0.76
Rnf13O54965 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.28□□□□□ -0.76
Rnf13O54965 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Rnf13O54965 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rnf13O54965 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.28□□□□□ -0.76
Rnf13O54965 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.28□□□□□ -0.76
Rnf13O54965 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.28□□□□□ -0.76
Rnf13O54965 Gm9797-202ENSMUST00000218003 294 ntBASIC10.28□□□□□ -0.76
Rnf13O54965 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.28□□□□□ -0.76
Rnf13O54965 Cts7-204ENSMUST00000225321 1257 ntBASIC10.28□□□□□ -0.76
Rnf13O54965 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.28□□□□□ -0.76
Rnf13O54965 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf13O54965 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms