Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 AC102569.1-201ENSMUST00000221563 685 ntBASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 CT025603.1-201ENSMUST00000224040 448 ntBASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 AC155245.1-201ENSMUST00000222266 1804 ntBASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gm37472-201ENSMUST00000192342 4052 ntBASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gm5764-201ENSMUST00000118817 885 ntBASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gm15982-201ENSMUST00000121681 554 ntBASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gm43275-201ENSMUST00000202053 1020 ntBASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 AC154407.1-201ENSMUST00000226777 526 ntBASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gm15031-201ENSMUST00000121341 210 ntBASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gm6518-201ENSMUST00000208450 342 ntBASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Gm8170-201ENSMUST00000218581 945 ntBASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc180J3QNE4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 CT030135.2-201ENSMUST00000225255 893 ntBASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC20.47■□□□□ 0.87
Ccdc180J3QNE4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Gm7964-201ENSMUST00000051522 1378 ntBASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Gm25288-201ENSMUST00000122800 265 ntBASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Gm27316-201ENSMUST00000184884 277 ntBASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ccdc180J3QNE4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC20.45■□□□□ 0.87
Ccdc180J3QNE4 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Gm15707-201ENSMUST00000118804 996 ntBASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms