Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chd3B1AR17 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Chd3B1AR17 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.15□□□□□ -0.62
Chd3B1AR17 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.15□□□□□ -0.62
Chd3B1AR17 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Chd3B1AR17 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chd3B1AR17 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.15□□□□□ -0.62
Chd3B1AR17 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
Chd3B1AR17 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chd3B1AR17 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.15□□□□□ -0.63
Chd3B1AR17 Gm25880-201ENSMUST00000104331 132 ntBASIC11.15□□□□□ -0.63
Chd3B1AR17 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.15□□□□□ -0.63
Chd3B1AR17 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.15□□□□□ -0.63
Chd3B1AR17 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.15□□□□□ -0.63
Chd3B1AR17 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Chd3B1AR17 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.63
Chd3B1AR17 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.15□□□□□ -0.63
Chd3B1AR17 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.15□□□□□ -0.63
Chd3B1AR17 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd3B1AR17 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.15□□□□□ -0.63
Chd3B1AR17 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Chd3B1AR17 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.15□□□□□ -0.63
Chd3B1AR17 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd3B1AR17 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd3B1AR17 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd3B1AR17 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd3B1AR17 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Chd3B1AR17 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Chd3B1AR17 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd3B1AR17 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chd3B1AR17 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chd3B1AR17 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Gm14807-201ENSMUST00000116640 983 ntBASIC11.14□□□□□ -0.63
Chd3B1AR17 Gm14213-201ENSMUST00000119778 768 ntBASIC11.14□□□□□ -0.63
Chd3B1AR17 Gm15329-201ENSMUST00000121408 155 ntBASIC11.14□□□□□ -0.63
Chd3B1AR17 Gm10169-201ENSMUST00000121822 348 ntBASIC11.14□□□□□ -0.63
Chd3B1AR17 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.14□□□□□ -0.63
Chd3B1AR17 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.14□□□□□ -0.63
Chd3B1AR17 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.14□□□□□ -0.63
Chd3B1AR17 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.14□□□□□ -0.63
Chd3B1AR17 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Chd3B1AR17 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.14□□□□□ -0.63
Chd3B1AR17 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chd3B1AR17 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.14□□□□□ -0.63
Chd3B1AR17 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd3B1AR17 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd3B1AR17 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd3B1AR17 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Chd3B1AR17 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd3B1AR17 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd3B1AR17 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd3B1AR17 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd3B1AR17 Gm8302-201ENSMUST00000119217 852 ntBASIC11.13□□□□□ -0.63
Chd3B1AR17 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd3B1AR17 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd3B1AR17 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.13□□□□□ -0.63
Chd3B1AR17 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd3B1AR17 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.13□□□□□ -0.63
Chd3B1AR17 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.13□□□□□ -0.63
Chd3B1AR17 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd3B1AR17 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.13□□□□□ -0.63
Chd3B1AR17 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 248.8 ms