Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Scn11aQ9R053 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn11aQ9R053 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn11aQ9R053 Gm28032-201ENSMUST00000184104 96 ntBASIC13.32□□□□□ -0.28
Scn11aQ9R053 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC13.32□□□□□ -0.28
Scn11aQ9R053 Gm4903-201ENSMUST00000210462 405 ntBASIC13.32□□□□□ -0.28
Scn11aQ9R053 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn11aQ9R053 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn11aQ9R053 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn11aQ9R053 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn11aQ9R053 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn11aQ9R053 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn11aQ9R053 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Gm12745-201ENSMUST00000121767 214 ntBASIC13.31□□□□□ -0.28
Scn11aQ9R053 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Gm20694-201ENSMUST00000176943 404 ntBASIC13.31□□□□□ -0.28
Scn11aQ9R053 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Ighv5-8-202ENSMUST00000191967 337 ntBASIC13.31□□□□□ -0.28
Scn11aQ9R053 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC13.31□□□□□ -0.28
Scn11aQ9R053 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC13.31□□□□□ -0.28
Scn11aQ9R053 AC102847.1-202ENSMUST00000226313 1245 ntBASIC13.31□□□□□ -0.28
Scn11aQ9R053 AC169511.1-201ENSMUST00000227639 995 ntBASIC13.31□□□□□ -0.28
Scn11aQ9R053 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.31□□□□□ -0.28
Scn11aQ9R053 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Gm43482-201ENSMUST00000202797 1861 ntBASIC13.31□□□□□ -0.28
Scn11aQ9R053 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn11aQ9R053 Erich3-203ENSMUST00000189969 3460 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm6158-201ENSMUST00000109467 904 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm6216-201ENSMUST00000182390 687 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm10580-201ENSMUST00000097985 396 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm10581-201ENSMUST00000097986 231 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm10582-201ENSMUST00000097987 396 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm10583-201ENSMUST00000097988 396 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm23604-201ENSMUST00000104311 132 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm11475-201ENSMUST00000118482 476 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm18552-201ENSMUST00000187425 538 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm37452-201ENSMUST00000194416 1160 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Gm8170-201ENSMUST00000218581 945 ntBASIC13.3□□□□□ -0.28
Scn11aQ9R053 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Scn11aQ9R053 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.29□□□□□ -0.28
Scn11aQ9R053 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scn11aQ9R053 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn11aQ9R053 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms