Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Gm26185-201ENSMUST00000157692 266 ntBASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Gm27618-201ENSMUST00000183671 60 ntBASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.05□□□□□ -0.96
Smco4Q9JIS3 AC124732.2-201ENSMUST00000221977 316 ntBASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm6152-201ENSMUST00000151704 340 ntBASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm17208-201ENSMUST00000168388 535 ntBASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm21854-201ENSMUST00000179901 471 ntBASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm5354-201ENSMUST00000182417 973 ntBASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm28760-201ENSMUST00000185995 736 ntBASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm8000-201ENSMUST00000188378 592 ntBASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm38294-201ENSMUST00000192831 381 ntBASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm37975-201ENSMUST00000195494 2099 ntBASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Pml-201ENSMUST00000085673 4481 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco4Q9JIS3 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Smco4Q9JIS3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms