Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 AC160340.2-201ENSMUST00000220812 3675 ntBASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.92□□□□□ -0.66
Ube4bQ9ES00 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Gm13736-201ENSMUST00000119272 253 ntBASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.91□□□□□ -0.66
Ube4bQ9ES00 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ube4bQ9ES00 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.91□□□□□ -0.66
Ube4bQ9ES00 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Mir1982-201ENSMUST00000157368 74 ntBASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Snora78-201ENSMUST00000158630 128 ntBASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Gm27514-201ENSMUST00000183692 110 ntBASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Gm38314-201ENSMUST00000195709 625 ntBASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Gm43433-201ENSMUST00000196573 481 ntBASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube4bQ9ES00 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Ube4bQ9ES00 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ube4bQ9ES00 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.67
Ube4bQ9ES00 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ube4bQ9ES00 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Ube4bQ9ES00 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ube4bQ9ES00 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube4bQ9ES00 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ube4bQ9ES00 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Ube4bQ9ES00 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube4bQ9ES00 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube4bQ9ES00 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube4bQ9ES00 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms