Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm14270-201ENSMUST00000118388 846 ntBASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Mir7051-201ENSMUST00000184167 73 ntBASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Gm39288-201ENSMUST00000210554 446 ntBASIC12.37□□□□□ -0.43
Trim54Q9ERP3 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Gm6722-201ENSMUST00000221586 390 ntBASIC12.37□□□□□ -0.43
Trim54Q9ERP3 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.37□□□□□ -0.43
Trim54Q9ERP3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Gm16219-201ENSMUST00000120096 274 ntBASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Gm37284-201ENSMUST00000193607 539 ntBASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Gm16380-201ENSMUST00000077997 478 ntBASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trim54Q9ERP3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim54Q9ERP3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms