Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Gm11660-201ENSMUST00000120955 412 ntBASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Gm3508-201ENSMUST00000186012 792 ntBASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Gm9797-202ENSMUST00000218003 294 ntBASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Ginm1-202ENSMUST00000065124 300 ntBASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tubb3Q9ERD7 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm13461-201ENSMUST00000120980 662 ntBASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm8199-201ENSMUST00000121323 823 ntBASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tubb3Q9ERD7 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms