Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gm29499-201ENSMUST00000189151 486 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gm28329-201ENSMUST00000191208 689 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gm29171-201ENSMUST00000191397 486 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gm8365-201ENSMUST00000197334 648 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gm17831-201ENSMUST00000205579 900 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gm8285-201ENSMUST00000208293 759 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gm44551-201ENSMUST00000208804 171 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gm2517-201ENSMUST00000215651 348 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdc40Q9DC48 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm6485-201ENSMUST00000160676 439 ntBASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm43002-201ENSMUST00000200310 155 ntBASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.62□□□□□ -0.71
Cdc40Q9DC48 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.62□□□□□ -0.71
Cdc40Q9DC48 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cdc40Q9DC48 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Gm15595-201ENSMUST00000120840 961 ntBASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdc40Q9DC48 Gm7666-201ENSMUST00000146631 819 ntBASIC10.61□□□□□ -0.71
Cdc40Q9DC48 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms