Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Gm43852-201ENSMUST00000202098 917 ntBASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Gm8342-201ENSMUST00000209839 757 ntBASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Gm6722-201ENSMUST00000221586 390 ntBASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gm11949-201ENSMUST00000117640 372 ntBASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gm15329-201ENSMUST00000121408 155 ntBASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gm7741-201ENSMUST00000181445 989 ntBASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp2aQ9DB34 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms