Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Gm8100-201ENSMUST00000182906 988 ntBASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Gm18212-201ENSMUST00000211678 889 ntBASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gtf3c6Q9D8P7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm43750-201ENSMUST00000199027 2493 ntBASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm14071-201ENSMUST00000117817 509 ntBASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm25881-201ENSMUST00000157783 103 ntBASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gtf3c6Q9D8P7 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gtf3c6Q9D8P7 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms