Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nop56Q9D6Z1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm15824-201ENSMUST00000119516 955 ntBASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm6013-201ENSMUST00000212264 699 ntBASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm26226-201ENSMUST00000082509 116 ntBASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nop56Q9D6Z1 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm22018-201ENSMUST00000104357 131 ntBASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms