Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Chd1lQ9CXF7 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.81□□□□□ -0.36
Chd1lQ9CXF7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd1lQ9CXF7 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.81□□□□□ -0.36
Chd1lQ9CXF7 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd1lQ9CXF7 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Gm20495-201ENSMUST00000173902 235 ntBASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Gm27514-201ENSMUST00000183692 110 ntBASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Gm38117-201ENSMUST00000194653 939 ntBASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Gm19187-201ENSMUST00000206781 892 ntBASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Gm5705-201ENSMUST00000066241 711 ntBASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Rims2-204ENSMUST00000226410 3685 ntBASIC12.8□□□□□ -0.36
Chd1lQ9CXF7 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Gm5070-201ENSMUST00000177599 862 ntBASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Gm4310-201ENSMUST00000177847 889 ntBASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Gm7653-201ENSMUST00000214567 508 ntBASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.79□□□□□ -0.36
Chd1lQ9CXF7 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Gm11930-201ENSMUST00000117788 190 ntBASIC12.78□□□□□ -0.36
Chd1lQ9CXF7 Gm6963-201ENSMUST00000147879 379 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms