Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Gm9540-201ENSMUST00000188230 478 ntBASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Gm9132-201ENSMUST00000210182 832 ntBASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.81□□□□□ -0.36
Smc1aQ9CU62 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Gm13809-201ENSMUST00000117921 597 ntBASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Gm11511-201ENSMUST00000118146 540 ntBASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Gm7600-201ENSMUST00000209657 785 ntBASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smc1aQ9CU62 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Gm11509-201ENSMUST00000117358 325 ntBASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Gm7722-201ENSMUST00000120646 741 ntBASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Gm8199-201ENSMUST00000121323 823 ntBASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.79□□□□□ -0.36
Smc1aQ9CU62 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Gm4607-201ENSMUST00000206649 577 ntBASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms