Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm13171-201ENSMUST00000117233 391 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Olfml3-204ENSMUST00000169286 874 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm23647-201ENSMUST00000175042 109 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Rn5s-201ENSMUST00000177555 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm22109-201ENSMUST00000177995 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm22291-201ENSMUST00000178027 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm23284-201ENSMUST00000178069 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm25018-201ENSMUST00000179081 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm25212-201ENSMUST00000179432 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm26391-201ENSMUST00000179843 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm24089-201ENSMUST00000093696 109 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Gm22344-201ENSMUST00000122642 278 ntBASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Gm25872-201ENSMUST00000177784 100 ntBASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Mir6387-201ENSMUST00000184042 108 ntBASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Gm19918-201ENSMUST00000194858 400 ntBASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Gm18001-201ENSMUST00000212023 688 ntBASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cldnd1Q9CQX5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms