Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpa3Q9CQ71 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Gm15352-201ENSMUST00000118696 270 ntBASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpa3Q9CQ71 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Gm10051-201ENSMUST00000145209 414 ntBASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpa3Q9CQ71 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms