Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Gm5244-201ENSMUST00000164001 339 ntBASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Gm25694-201ENSMUST00000175448 282 ntBASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Gm5274-201ENSMUST00000182641 1003 ntBASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Gm3945-201ENSMUST00000196637 683 ntBASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 AC154433.1-201ENSMUST00000224401 1183 ntBASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Gm5292-201ENSMUST00000073317 580 ntBASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Atf7-201ENSMUST00000096143 390 ntBASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh15Q99PJ1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Gm43097-201ENSMUST00000196867 151 ntBASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Gm44908-201ENSMUST00000208610 266 ntBASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Gm18042-201ENSMUST00000219887 790 ntBASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh15Q99PJ1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Gm21963-201ENSMUST00000179519 330 ntBASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Gm45308-201ENSMUST00000210610 415 ntBASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 AC107711.3-201ENSMUST00000228939 1035 ntBASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Gm45663-201ENSMUST00000210429 1632 ntBASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Gm5174-201ENSMUST00000171131 1423 ntBASIC12.58□□□□□ -0.4
Pcdh15Q99PJ1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdh15Q99PJ1 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms