Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm23949-201ENSMUST00000104027 127 ntBASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm23596-201ENSMUST00000104304 132 ntBASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm27320-201ENSMUST00000184892 109 ntBASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm5714-201ENSMUST00000197343 566 ntBASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm43630-201ENSMUST00000201550 776 ntBASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm7783-201ENSMUST00000204795 781 ntBASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdk5rap3Q99LM2 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm15711-201ENSMUST00000118889 535 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm24749-201ENSMUST00000157838 343 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm8815-201ENSMUST00000173809 620 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm38151-201ENSMUST00000195085 289 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm44262-201ENSMUST00000204969 372 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Cdk5rap3Q99LM2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdk5rap3Q99LM2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms