Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.48□□□□□ -0.57
Cdk9Q99J95 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.48□□□□□ -0.57
Cdk9Q99J95 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gm45865-201ENSMUST00000211815 945 ntBASIC11.48□□□□□ -0.57
Cdk9Q99J95 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Morn2-202ENSMUST00000227729 656 ntBASIC11.48□□□□□ -0.57
Cdk9Q99J95 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.48□□□□□ -0.57
Cdk9Q99J95 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.48□□□□□ -0.57
Cdk9Q99J95 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdk9Q99J95 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cdk9Q99J95 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Gm2991-201ENSMUST00000173338 480 ntBASIC11.47□□□□□ -0.57
Cdk9Q99J95 Gm6621-201ENSMUST00000193251 772 ntBASIC11.47□□□□□ -0.57
Cdk9Q99J95 Gm43758-201ENSMUST00000199500 367 ntBASIC11.47□□□□□ -0.57
Cdk9Q99J95 Gm7783-201ENSMUST00000204795 781 ntBASIC11.47□□□□□ -0.57
Cdk9Q99J95 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.47□□□□□ -0.57
Cdk9Q99J95 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdk9Q99J95 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.46□□□□□ -0.57
Cdk9Q99J95 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Gm25214-201ENSMUST00000104573 129 ntBASIC11.46□□□□□ -0.57
Cdk9Q99J95 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Gm11531-201ENSMUST00000117614 555 ntBASIC11.46□□□□□ -0.57
Cdk9Q99J95 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.46□□□□□ -0.57
Cdk9Q99J95 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms